STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3546Putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (116 aa)    
Predicted Functional Partners:
XM1_3542
Protein of unknown function; No homology to any previously reported sequences.
 
     0.867
XM1_4326
Putative NADH-ubiquinone oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.815
XM1_3545
Conserved protein of unknown function(cintaining Mammalian cell entry-related omain,38-115); Homologs of previously reported genes of unknown function.
     
 0.752
XM1_3544
Conserved protein of unknown function(containing Mammalian cell entry-related domain,36-113); Homologs of previously reported genes of unknown function.
     
 0.744
XM1_3543
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.693
nuoG
NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
  
     0.660
XM1_1954
Conserved protein of unknown function（Stringent starvation protein B,13-127） Homologs of previously reported genes of unknown function.
 
   
 0.649
XM1_0826
Homologs of previously reported genes of unknown function.
  
     0.619
XM1_4309
Cytochrome c2 iso-2; Function of strongly homologous gene; enzyme.
  
     0.595
cycA
Cytochrome C2(Cytochrome c domain,26-121); Function of strongly homologous gene; factor.
  
     0.573
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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