STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3575Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (225 aa)    
Predicted Functional Partners:
XM1_3574
ABC transporter, permease protein; Function of strongly homologous gene; transporter.
 0.993
LolC
ABC-type transport system, permease component,Lipoprotein ABC transporter; Function of strongly homologous gene; transporter.
 
 0.950
XM1_3992
ABC-type transport system, involved in lipoprotein release, permease component; Function of strongly homologous gene; transporter.
  
 0.945
lolD-2
Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
  
 
0.910
XM1_3573
Putative Secretion protein HlyD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.904
XM1_3306
Peptide ABC transporter permease; Function of strongly homologous gene; transporter.
  
 
 0.813
XM1_3568
Putative 8-amino-7-oxononanoate synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.759
XM1_2305
Putative ATP-dependent Zn protease (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the AAA ATPase family.
 
   
 0.757
XM1_3569
Putative Carboxylesterase BioH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.749
XM1_3570
Putative methltransferase, enzyme of biotin synthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.749
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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