STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3604FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Function of strongly homologous gene; enzyme. (379 aa)    
Predicted Functional Partners:
XM1_2728
Putative Cytochrome c553; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.964
XM1_2926
Putative cytochrome c, soxE homolog; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
   
 0.964
fccB-2
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain; Function of strongly homologous gene; carrier.
  
  
  0.951
fccB
Putative Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
  
 
0.920
XM1_3029
Putative sulfite reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 0.919
dsrB
Sulfite reductase, dissimilatory-type subunit beta; Function of strongly homologous gene; enzyme.
 
  
  0.915
dsrA
Sulfite reductase, dissimilatory-type subunit alpha; Function of strongly homologous gene; enzyme.
 
  
  0.914
cysK
Cysteine synthase A, O-acetylserine sulfhydrolase A subunit(Cysteine synthase A,18-316); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.908
ytkP
Cysteine synthase-like protein; Function of strongly homologous gene; enzyme.
    
 0.908
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
    
 0.907
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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