STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3605Conserved protein of unknown function(containing TusA-like domain,3-75); Homologs of previously reported genes of unknown function; Belongs to the sulfur carrier protein TusA family. (76 aa)    
Predicted Functional Partners:
XM1_1766
Putative sulfur-carrier protein（TusA-like domain,3-74） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier; Belongs to the sulfur carrier protein TusA family.
  
  
  0.975
tusD
Methylsulfur transfer protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.965
nifS
Cysteine desulfurase; Function of strongly homologous gene; enzyme.
   
 0.964
iscS
Cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
   
 0.964
XM1_3606
Protein of unknown function; No homology to any previously reported sequences.
 
  
 0.935
XM1_3604
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Function of strongly homologous gene; enzyme.
 
   
 0.826
XM1_1170
Homologs of previously reported genes of unknown function.
 
  
 0.794
XM1_3607
Protein of unknown function; No homology to any previously reported sequences.
       0.561
XM1_0908
Putative adenylyl-sulfate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.542
cysC
Adenylylsulphate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.542
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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