STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3624Uncharacterized protein; Homologs of previously reported genes of unknown function. (209 aa)    
Predicted Functional Partners:
XM1_3625
Uncharacterized protein; Homologs of previously reported genes of unknown function.
  
  
 0.821
XM1_3626
Protein of unknown function; No homology to any previously reported sequences.
       0.782
XM1_3627
Protein of unknown function; No homology to any previously reported sequences.
       0.782
XM1_0156
Putative penicillin-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 
 0.634
XM1_3623
Response regulator containing a CheY-like receiver domain and a GGDEF domain (fragment); Function of strongly homologous gene; enzyme.
       0.514
fliG
Putative metal dependent phosphohydrolase; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
   0.493
XM1_0440
Putative inhibitor of MCP methylation, CheC-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
    
   0.493
fliL
Flagellar basal body-associated protein fliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.493
XM1_3554
Protein of unknown function; No homology to any previously reported sequences.
  
     0.483
XM1_4029
Protein of unknown function; No homology to any previously reported sequences.
  
     0.471
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.