STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3659Putative Translation initiation factor IF-2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (346 aa)    
Predicted Functional Partners:
XM1_1659
Putative ATPase(Domain of unknown function DUF87,16-120); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.633
XM1_1160
Homologs of previously reported genes of unknown function.
  
     0.602
XM1_1868
Homologs of previously reported genes of unknown function.
  
     0.573
XM1_4513
Conserved protein of unknown function (Staphylococcal nuclease 40-167); Homologs of previously reported genes of unknown function.
  
     0.533
XM1_2125
Homologs of previously reported genes of unknown function.
  
     0.491
XM1_1171
Conserved exported protein of unknown function(LTXXQ motif family protein,52-146); Homologs of previously reported genes of unknown function.
  
     0.487
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.479
XM1_4779
Putative hydrolase or acyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.472
XM1_1972
Homologs of previously reported genes of unknown function.
  
     0.457
XM1_2966
Conserved protein of unknown function (phosphatases II 8-172); Homologs of previously reported genes of unknown function.
  
     0.443
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.