STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccpCytochrome c551 peroxidase; Function of strongly homologous gene; enzyme. (331 aa)    
Predicted Functional Partners:
XM1_2038
Putative Nitrite reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.845
nirF
Protein NirF; Function of strongly homologous gene; enzyme.
  
 
 0.683
XM1_2528
Putative Quinohemoprotein amine dehydrogenase 40 kDa subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.682
tolB
Protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.678
torC
Cytochrome c-type protein TorC; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the TorC/TorY family.
  
  
 0.599
ftsA
Cell division protein FtsA(Cell division protein FtsA,8-379); Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
      
 0.570
XM1_3672
Protein of unknown function; No homology to any previously reported sequences.
       0.565
XM1_3173
PPK2 domain-containing protein; Homologs of previously reported genes of unknown function.
  
    0.501
XM1_1382
Conserved protein of unknown function（Polyphosphate:AMP phosphotransferase,2-501） Homologs of previously reported genes of unknown function.
  
    0.487
XM1_3045
Cytochrome b subunit of the bc complex; Function of strongly homologous gene; enzyme.
   
  
 0.462
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.