STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3695Exopolyphosphatase; Function of strongly homologous gene; enzyme. (494 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.977
spoT
Bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
 
 
 0.938
XM1_1582
Putative exopolyphosphatase（Ppx/GppA phosphatase,29-324） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
0.932
XM1_3697
Phosphohistidine phosphatase, SixA; Function of strongly homologous gene; enzyme.
 
 
   0.734
phoU
Transcriptional repressor for high-affinity phosphate uptake; Plays a role in the regulation of phosphate uptake.
     
 0.572
phoU-2
Phosphate-specific transport system accessory protein PhoU; Plays a role in the regulation of phosphate uptake.
     
 0.572
XM1_0792
Putative diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
      
 0.551
XM1_3694
Protein of unknown function; No homology to any previously reported sequences; Belongs to the UPF0178 family.
       0.525
XM1_1382
Conserved protein of unknown function（Polyphosphate:AMP phosphotransferase,2-501） Homologs of previously reported genes of unknown function.
 
  
 0.515
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.510
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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