STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3705ADP-heptose:LPS heptosyltransferase; Function of strongly homologous gene; enzyme. (327 aa)    
Predicted Functional Partners:
purN
Phosphoribosylglycinamide formyltransferase 1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.784
XM1_1037
Putative ADP-heptose:LPS heptosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.734
XM1_0772
Putative ADP-heptose:LPS heptosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.718
XM1_1267
Putative ADP-heptose of LPS heptosyltransferase（Glycosyl transferase, family 9,73-282） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.664
XM1_0152
Protein of unknown function (ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones 6-114); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.652
purM
Phosphoribosylaminoimidazole synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.621
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
       0.611
XM1_0311
Putative Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.603
XM1_3707
Signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
       0.603
XM1_3702
Protein of unknown function; No homology to any previously reported sequences.
 
     0.584
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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