STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3771RTX toxins and related Ca2+-binding protein; Function of strongly homologous gene; receptor. (2054 aa)    
Predicted Functional Partners:
XM1_2699
Protein of unknown function; No homology to any previously reported sequences.
  
  
 
0.928
XM1_3774
Membrane-fusion protein; Function of strongly homologous gene; transporter.
 
    0.912
XM1_3775
Peptidase, M50 family protein; Function of strongly homologous gene; enzyme.
 
    0.912
XM1_4578
Putative cadherin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
  
  
 
0.900
XM1_3773
HlyD family secretion protein; Function of strongly homologous gene; regulator; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.882
XM1_3770
Outer membrane efflux protein; Function of strongly homologous gene; structure.
 
  
 0.881
XM1_0271
Conserved protein of unknown function,containing haemolysin-type calcium-binding domain NodA; Homologs of previously reported genes of unknown function.
 
 
 0.826
XM1_3772
Protein of unknown function; No homology to any previously reported sequences.
       0.773
XM1_4209
Putative adenylate cyclase (Partial); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.751
XM1_2364
Homologs of previously reported genes of unknown function.
  
 
   0.744
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.