STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3778Putative permease of the major facilitator superfamily (MFS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (412 aa)    
Predicted Functional Partners:
XM1_3776
Protein of unknown function; No homology to any previously reported sequences.
       0.532
XM1_3771
RTX toxins and related Ca2+-binding protein; Function of strongly homologous gene; receptor.
       0.465
XM1_3779
Protein of unknown function; No homology to any previously reported sequences.
       0.461
XM1_3772
Protein of unknown function; No homology to any previously reported sequences.
       0.452
XM1_3773
HlyD family secretion protein; Function of strongly homologous gene; regulator; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.452
XM1_3774
Membrane-fusion protein; Function of strongly homologous gene; transporter.
       0.452
XM1_3775
Peptidase, M50 family protein; Function of strongly homologous gene; enzyme.
       0.452
guaA
GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP.
     
 0.446
pxpA
Putative lactam utilization protein, UPF0271 family; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
   
    0.406
XM1_3770
Outer membrane efflux protein; Function of strongly homologous gene; structure.
  
    0.406
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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