STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3818Conserved membrane protein of unknown function(containing NnrS domain 15-187); Homologs of previously reported genes of unknown function. (394 aa)    
Predicted Functional Partners:
XM1_3819
Molybdopterin biosynthesis protein; Function of strongly homologous gene; enzyme.
       0.773
norB
Nitric oxide reductase subunit B; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.605
fliQ
Peptidase U32 family (collagenase-like); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
    0.582
yhbU
Peptidase (collagenase-like); Function of strongly homologous gene; enzyme.
 
    0.569
norC
Nitric oxide reductase subunit C; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.533
XM1_3820
Hemerythrin domain-containing protein; Homologs of previously reported genes of unknown function.
       0.526
XM1_0520
Conserved protein of unknown function (NnrU family protein); Homologs of previously reported genes of unknown function.
 
    0.513
XM1_3817
MarR family transcriptional regulator; Function of strongly homologous gene; regulator.
       0.462
norD
NorD protein required for nitric oxide reductase (Nor) activity; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
    0.459
XM1_0185
Putative lipid carrier protein（sterol-binding domain） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
     0.439
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.