STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3866Conserved protein of unknown function（ No homology to any previously reported sequences. (97 aa)    
Predicted Functional Partners:
XM1_3867
Protein of unknown function; No homology to any previously reported sequences.
 
  
 0.961
XM1_4498
Homologs of previously reported genes of unknown function.
 
  
 0.836
XM1_3868
Protein of unknown function [TPR repeat domain,2-168]; No homology to any previously reported sequences.
       0.774
XM1_3869
Na+/H+ antiporter NhaD and related arsenite permeases NhaD and related arsenite permeases; Function of strongly homologous gene; transporter.
       0.504
mak
Manno(fructo)kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.504
XM1_3865
Uncharacterized protein; Homologs of previously reported genes of unknown function.
       0.497
XM1_4584
Homologs of previously reported genes of unknown function.
 
     0.465
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.