STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3869Na+/H+ antiporter NhaD and related arsenite permeases NhaD and related arsenite permeases; Function of strongly homologous gene; transporter. (402 aa)    
Predicted Functional Partners:
mak
Manno(fructo)kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.785
XM1_2239
Putative Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
  
 0.511
XM1_3868
Protein of unknown function [TPR repeat domain,2-168]; No homology to any previously reported sequences.
  
    0.507
XM1_3866
Conserved protein of unknown function（ No homology to any previously reported sequences.
       0.504
XM1_3867
Protein of unknown function; No homology to any previously reported sequences.
       0.504
XM1_3871
cAMP-binding protein; Function of strongly homologous gene; regulator.
       0.451
mamO
Magnetosome protein MamO; Function of strongly homologous gene; putative enzyme.
     
 0.432
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.