STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctBSensor histidine kinase, transcriptional regulator of C4-dicarboxylate transport; Function of strongly homologous gene; enzyme. (599 aa)    
Predicted Functional Partners:
glnG
Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD; Function of strongly homologous gene; regulator.
 0.991
XM1_3255
C4-dicarboxylate transport sensor protein dctB; Function of strongly homologous gene; cell process.
  
  
  0.944
XM1_2061
Putative Signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
0.564
XM1_2919
Putative blue-light-activated sensor histidine kinase (FixL-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
0.541
XM1_4672
Putative histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
0.526
XM1_4009
Putative histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
0.521
XM1_3907
Putative Septum formation initiator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
    0.520
XM1_3256
Protein of unknown function; No homology to any previously reported sequences.
 
 
0.515
XM1_1590
Homologs of previously reported genes of unknown function.
 
 
0.508
XM1_4319
Putative signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
0.484
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.