STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifHNitrogenase iron protein, nifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (295 aa)    
Predicted Functional Partners:
nifD
Nitrogenase molybdenum-iron protein alpha chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.999
nifK
Nitrogenase molybdenum-iron protein beta chain, nifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
 0.999
nifE
Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.978
nifN
Nitrogenase iron-molybdenum cofactor biosynthesis protein NifN; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.978
fdxB
Ferredoxin III 4[4Fe-4S], nif-specific; Function of homologous gene experimentally demonstrated in an other organism; carrier.
 
  
 0.969
nifB
FeMo cofactor biosynthesis protein NifB; Function of homologous gene experimentally demonstrated in an other organism; factor.
 
  
 0.958
glnA
Glutamine synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.943
nosZ
Nitrous oxide reductase; Function of strongly homologous gene; enzyme.
     
 0.937
nifX
Nitrogen fixation protein NifX; Function of homologous gene experimentally demonstrated in an other organism; factor.
 
  
 0.936
nirB
Nitrite reductase, large subunit, NAD(P)H-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.911
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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