STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3963Predicted signal-transduction protein containing cAMP-binding and CBS domains; Function of strongly homologous gene; putative receptor. (479 aa)    
Predicted Functional Partners:
actP-3
Acetate transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.703
XM1_3961
Acetate transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.703
actP
Acetate transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.654
actP-2
Acetate transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.651
XM1_3964
DNA polymerase III; Function of strongly homologous gene; enzyme.
     0.565
XM1_0833
Putative pyruvate, phosphate dikinase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.
 
  
 0.558
XM1_3440
Hypothetical protein; No homology to any previously reported sequences.
  
  
 0.520
XM1_3532
Putative inner membrane protein involved in acetate transport; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
  
  
 0.520
yjcH
Conserved hypothetical protein; Function of strongly homologous gene; putative membrane component.
  
  
 0.520
guaA
GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP.
     
 0.490
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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