STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3969Uncharacterized protein; Homologs of previously reported genes of unknown function. (253 aa)    
Predicted Functional Partners:
XM1_3970
Protein of unknown function; No homology to any previously reported sequences.
       0.618
purC-2
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Function of strongly homologous gene; enzyme; Belongs to the SAICAR synthetase family.
       0.567
XM1_4102
Homologs of previously reported genes of unknown function.
  
     0.562
XM1_2843
Uncharacterized protein; Homologs of previously reported genes of unknown function.
  
     0.558
XM1_4103
Serine/threonine protein kinase; Function of strongly homologous gene; enzyme.
  
     0.520
purS
Factor required for phosphoribosylformylglycinamidine synthetase activity; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and Pu [...]
       0.494
XM1_0668
Homologs of previously reported genes of unknown function.
  
     0.470
XM1_1247
Homologs of previously reported genes of unknown function.
  
     0.468
XM1_4389
Cell shape determining protein MreD; Function of strongly homologous gene; structure.
  
     0.468
XM1_1419
Homologs of previously reported genes of unknown function.
  
     0.456
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.