STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3999Two-component response regulator; Function of strongly homologous gene; regulator. (247 aa)    
Predicted Functional Partners:
XM1_4000
Signal transduction histidine kinase regulating C4-dicarboxylate transport system; Function of strongly homologous gene; enzyme.
 
 0.997
XM1_1200
Uncharacterized protein; Function of strongly homologous gene; enzyme.
 
 0.970
chvI
Two-component system, OmpR family, response regulator ChvI; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
  
 
0.917
XM1_3998
Protein of unknown function, putative secreted protein; No homology to any previously reported sequences.
     
 0.880
XM1_1590
Homologs of previously reported genes of unknown function.
  
 
 0.761
XM1_3256
Protein of unknown function; No homology to any previously reported sequences.
  
 
 0.761
XM1_4319
Putative signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.761
XM1_4673
Putative response regulator transcriptional regulatory protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.759
XM1_1591
Membrane protein of unknown function(PAS domain,112-232); No homology to any previously reported sequences.
  
 
 0.757
XM1_4009
Putative histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.748
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.