STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybaLNner membrane protein YbaL; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (580 aa)    
Predicted Functional Partners:
XM1_4348
Glutathione-regulated potassium-efflux system protein kefB; Function of strongly homologous gene; transporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
0.698
XM1_4006
Putative universal stress protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
     
 0.669
XM1_4781
Homologs of previously reported genes of unknown function.
  
    0.550
XM1_3434
Putative cation/H+ antiporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.519
XM1_0727
Putative electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
  
  
 0.471
torR
DNA-binding response regulator in two-component regulatory system with TorS; Function of homologous gene experimentally demonstrated in an other organism; regulator.
     
 0.459
XM1_0658
Putative cation/proton antiporter, Na+/H+ exchanger family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
     
 0.435
XM1_1241
Putative Small-conductance mechanosensitive channel (Mechanosensitive ion channel MscS,211-410); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.428
ribB
Riboflavin biosynthesis protein RibBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
   0.425
trkD
Potassium transporter（K+ potassium transporter,24-556） Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.
     
 0.412
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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