STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4065Conserved protein of unknown function (Lysozyme-like domain 89-242); Homologs of previously reported genes of unknown function. (246 aa)    
Predicted Functional Partners:
XM1_4066
Homologs of previously reported genes of unknown function.
       0.784
XM1_4069
Putative Mu-like prophage FluMu protein gp27; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
       0.721
XM1_4067
Conserved protein of unknown function (Bacteriophage Mu, Gp25 5-119); Homologs of previously reported genes of unknown function.
       0.689
XM1_4068
Conserved protein of unknown function (putative bacteriophage protein GP26); Homologs of previously reported genes of unknown function.
       0.689
XM1_2661
Homologs of previously reported genes of unknown function.
  
     0.521
XM1_4071
Putative Mu-like prophage FluMu protein gp28; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
       0.499
XM1_4072
Mu-like prophage FluMu protein gp29; Function of strongly homologous gene; extrachromosomal origin.
       0.498
XM1_4073
Phage head morphogenesis protein; Function of strongly homologous gene; extrachromosomal origin.
       0.497
XM1_1277
Putative 60S ribosomal protein L22; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.460
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.455
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.