STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4072Mu-like prophage FluMu protein gp29; Function of strongly homologous gene; extrachromosomal origin. (521 aa)    
Predicted Functional Partners:
XM1_4073
Phage head morphogenesis protein; Function of strongly homologous gene; extrachromosomal origin.
    0.964
XM1_4071
Putative Mu-like prophage FluMu protein gp28; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
    0.952
XM1_4076
Mu-like prophage FluMu major head subunit; Function of strongly homologous gene; extrachromosomal origin.
 
  
 0.914
XM1_4074
Mu-like prophage FluMu I protein; Function of strongly homologous gene; extrachromosomal origin.
 
    0.890
XM1_4075
Homologs of previously reported genes of unknown function.
 
     0.871
XM1_4078
Putative Mu-like prophage protein gp36; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
   
 0.855
XM1_4079
Putative Phage virion morphogenesis (tail completion) protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
    0.854
XM1_4059
Putative Mu-like prophage protein gp16; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
    0.844
XM1_4042
Putative transposase (Bacteriophage Mu, transposase 25-230; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
  
 0.819
XM1_4082
Bacteriophage Mu tail sheath; Function of strongly homologous gene; extrachromosomal origin.
 
     0.814
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.