STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4130Putative Thioredoxin (H-type,TRX-H); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (122 aa)    
Predicted Functional Partners:
XM1_4258
Putative fused thiol:disulfide interchange protein: activator of DsbC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.822
msrA
Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.766
ahpC
Alkyl hydroperoxide reductase, C22 subunit, thioredoxin-like (detoxification of hydroperoxides); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 0.710
ahpC-2
Alkyl hydroperoxide reductase, C22 subunit; Function of strongly homologous gene; enzyme.
  
 0.710
XM1_1064
Formate dehydrogenase beta subunit; Function of strongly homologous gene; enzyme.
  
 
 0.645
hoxF
NAD-reducing hydrogenase HoxS subunit alpha (HoxF); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.645
lpd
Dihydrolipoyl dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.620
lpdV
Dihydrolipoyl dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.620
GOR
Glutathione reductase, chloroplastic; Maintains high levels of reduced glutathione.
  
 0.620
rpoB
RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.610
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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