STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4231Putative transcriptional regulator, Crp/Fnr family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (231 aa)    
Predicted Functional Partners:
XM1_3952
Function of strongly homologous gene; regulator.
  
     0.606
XM1_0471
Putative cAMP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.601
XM1_4232
Putative membrane protein (Sulphur transport domain 82-123); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
       0.590
XM1_4233
Putative transporter component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
       0.590
XM1_4234
Putative carboxymuconolactone decarboxylase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.590
XM1_2023
CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.565
XM1_3871
cAMP-binding protein; Function of strongly homologous gene; regulator.
  
     0.544
XM1_3329
Putative transcriptional regulator, Crp/Fnr family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
   
 0.542
XM1_1697
Putative cAMP-binding protein(RmlC-like jelly roll fold,16-150); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.506
XM1_1698
Putative transcriptional regulator, Crp/Fnr family(RmlC-like jelly roll fold,13-147); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.502
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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