STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsrBSulfite reductase, dissimilatory-type subunit beta; Function of strongly homologous gene; enzyme. (356 aa)    
Predicted Functional Partners:
dsrA
Sulfite reductase, dissimilatory-type subunit alpha; Function of strongly homologous gene; enzyme.
 
0.999
tusE
Gamma subunit of dissimilatory sulfite reductase TusE/DsrC; Function of homologous gene experimentally demonstrated in an other organism; factor.
 
 
 
 0.980
dsrF
Intracellular sulfur oxidation protein DsrF/TusC; Function of strongly homologous gene; enzyme.
 
   
 0.941
tusD
Methylsulfur transfer protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.934
dmsC
Anaerobic DMSO reductase anchor subunit; Function of strongly homologous gene; enzyme.
 
  
 0.933
dmsA
Anaerobic dimethyl sulfoxide reductase chain A; Function of strongly homologous gene; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.926
dmsB
Anaerobic dimethyl sulfoxide reductase chain B; Function of strongly homologous gene; enzyme.
 
 
 0.923
XM1_3604
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Function of strongly homologous gene; enzyme.
 
  
  0.915
hupK
Hydrogenase expression/formation protein HupK; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
  0.912
XM1_2181
Putative Fe-S-cluster-containing hydrogenase components 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
 
 0.909
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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