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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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XM1_4250Putative Hdr-like menaquinol oxidoreductase cytochrome b-like subunit (DsrM); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (241 aa)    
Predicted Functional Partners:
hmeD
Hdr-like menaquinol oxidoreductase iron-sulfur subunit 2 (DsrK); Function of strongly homologous gene; enzyme.
 
 
 0.969
nirD
Assimilatory nitrite reductase [NAD(P)H] small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.950
tusE
Gamma subunit of dissimilatory sulfite reductase TusE/DsrC; Function of homologous gene experimentally demonstrated in an other organism; factor.
 
   
 0.934
nirB
Nitrite reductase, large subunit, NAD(P)H-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.927
XM1_4252
Putative NADPH-dependent glutamate synthase beta chain and related oxidoreductase (dsrL); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.926
XM1_4255
Putative Hdr-like menaquinol oxidoreductase integral membrane subunit (HmeB/DsrP); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
  
 0.911
nasA
Nitrate reductase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.909
napA
Nitrate reductase, periplasmic, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
    
 0.909
nrtC
Protein of unknown function (MobA/MobL protein 2-87 and related TraL/A; Function of homologous gene experimentally demonstrated in an other organism; transporter.
     
 0.907
nirS
Nitrite reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.906
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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