STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4260Conserved protein of unknown function (CheY-like superfamily 15-208); Homologs of previously reported genes of unknown function. (523 aa)    
Predicted Functional Partners:
XM1_3056
Conserved protein of unknown function(containing CHAT domain,876-1217); Homologs of previously reported genes of unknown function.
 
  
 0.670
XM1_3682
Homologs of previously reported genes of unknown function.
 
  
 0.597
XM1_4261
Homologs of previously reported genes of unknown function.
       0.531
XM1_2052
Homologs of previously reported genes of unknown function.
  
     0.503
XM1_4513
Conserved protein of unknown function (Staphylococcal nuclease 40-167); Homologs of previously reported genes of unknown function.
 
     0.502
XM1_0773
Homologs of previously reported genes of unknown function.
  
    0.498
XM1_0015
Putative site-specific recombinase, resolvase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 
 0.494
XM1_1299
Putative Methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.487
XM1_4344
Homologs of previously reported genes of unknown function.
  
     0.487
XM1_0745
Putative Nuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.486
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.