STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4268Putative transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (175 aa)    
Predicted Functional Partners:
XM1_4270
Putative multidrug efflux transporter (RND family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.796
XM1_4269
Putative RND efflux membrane fusion protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.764
XM1_4271
Putative RNA pseudouridine synthase(rluC/rluD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.758
XM1_0525
Putative Transcriptional regulator, MarR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
   
 0.534
XM1_4272
Putative universal stress protein UspA and related nucleotide-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
  
 0.531
mlpA
Specific processing protease; Function of strongly homologous gene; enzyme; Belongs to the peptidase M16 family.
       0.505
XM1_4267
Putative ABC-type branched-chain amino acid transport systems; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.505
XM1_2652
Putative Phenolpthiocerol synthesis polyketide synthase ppsA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.453
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.428
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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