STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4274Conserved protein of unknown function （AsmA 3-209） Homologs of previously reported genes of unknown function. (665 aa)    
Predicted Functional Partners:
crcB
Putative inner membrane protein CrcB associated with chromosome condensation; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
  
    0.774
XM1_4275
Protein of unknown function; No homology to any previously reported sequences.
       0.768
XM1_4276
Conserved protein of unknown function (Nitrogen regulatory protein 1-110); Homologs of previously reported genes of unknown function.
       0.768
XM1_4273
Putative outer membrane protein related peptidoglycan-associated (Lipo) protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
  
 0.720
XM1_4278
Protein of unknown function; No homology to any previously reported sequences.
       0.557
XM1_4279
Putative response regulator (Motif C-terminal to PAS motifs 78-118; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.557
XM1_1360
Putative Type IV pili component(Pilus biogenesis CpaD-related,10-203); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
  
     0.446
XM1_1369
Putative Flp pilus assembly protein TadG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
  
     0.443
XM1_0805
Conserved protein of unknown function (Transport-associated and nodulation domain 129-192); Homologs of previously reported genes of unknown function.
  
  
 0.408
XM1_0636
Homologs of previously reported genes of unknown function.
   
    0.407
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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