STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4292GCN5-related N-acetyltransferase; Function of strongly homologous gene; enzyme. (167 aa)    
Predicted Functional Partners:
XM1_4293
Putative HTH-type transcriptional regulator BadM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 
 0.940
bcrB
Benzoyl-CoA reductase subunit B; Function of strongly homologous gene; enzyme.
  
     0.746
XM1_3815
Uncharacterized protein; Homologs of previously reported genes of unknown function.
  
     0.739
bcrC
Benzoyl-CoA reductase subunit C; Function of strongly homologous gene; putative enzyme.
  
   
 0.738
bcrA
Benzoyl-CoA reductase subunit A; Function of strongly homologous gene; enzyme.
  
    0.729
XM1_2898
Putative 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.712
XM1_2288
Putative 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.706
bcrD
Benzoyl-CoA reductase subunit D; Function of strongly homologous gene; enzyme.
  
    0.696
XM1_2899
Putative 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.674
XM1_2289
Putative 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.664
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.