STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4308Putative Efflux pump membrane transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (1059 aa)    
Predicted Functional Partners:
XM1_4307
Putative component of multidrug efflux pump, acrB/acrD/acrF family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.967
mdtA
Multidrug efflux system, subunit A; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.902
XM1_4313
Putative multidrug efflux outer membrane protein, RND family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 0.900
XM1_3338
Outer membrane protein; Function of strongly homologous gene; structure.
 
 0.866
XM1_2516
Putative Efflux transporter, RND family, MFP subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.830
XM1_4269
Putative RND efflux membrane fusion protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.806
XM1_3573
Putative Secretion protein HlyD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.710
XM1_1881
Putative Membrane-fusion protein(RND efflux pump, membrane fusion protein,260-519); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.615
XM1_3773
HlyD family secretion protein; Function of strongly homologous gene; regulator; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.613
XM1_4577
Putative membrane-fusion protein (or HlyD family secretion protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.608
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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