STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4335Putative amino acid ABC transporter periplasmic protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (253 aa)    
Predicted Functional Partners:
XM1_1180
Polar amino acid transport system substrate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.587
XM1_4716
Conserved protein of unknown function (6-hydroxymethylpterin diphosphokinase MptE-like 270-419); Homologs of previously reported genes of unknown function.
  
 
   0.585
fadH
2,4-dienoyl-CoA reductase, NADH and FMN-linked; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.573
XM1_1797
Conserved exported protein of unknown function(Cupredoxin,6-161); Homologs of previously reported genes of unknown function.
  
     0.522
XM1_2192
Putative ABC-type polar amino acid transport system, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.513
XM1_1625
Homologs of previously reported genes of unknown function.
  
     0.504
XM1_4334
Putative response regulator containing a CheY-like receiver domain and a GGDEF domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.488
gltK
Glutamate and aspartate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.486
XM1_0710
Homologs of previously reported genes of unknown function.
  
     0.485
XM1_0957
Putative SAM-dependent methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
   0.469
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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