STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4344Homologs of previously reported genes of unknown function. (808 aa)    
Predicted Functional Partners:
fadB
3-hydroxyacyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.952
XM1_3682
Homologs of previously reported genes of unknown function.
  
 
 
 0.782
XM1_1275
Conserved protein of unknown function（NERD,16-109） Homologs of previously reported genes of unknown function.
  
    0.780
XM1_1531
Conserved protein of unknown function (Flagellin, D0/D1 domain); Homologs of previously reported genes of unknown function.
  
   
 0.777
XM1_2602
Putative Phage-related minor tail protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
    0.776
XM1_4304
Conserved protein of unknown function (Concanavalin A-like lectin/glucanases superfamily; Homologs of previously reported genes of unknown function.
  
   
 0.775
XM1_2915
Homologs of previously reported genes of unknown function.
  
     0.773
XM1_3063
Conserved protein of unknown function(containing Exostosin-like domain,148-233); Homologs of previously reported genes of unknown function.
  
     0.772
XM1_2364
Homologs of previously reported genes of unknown function.
  
     0.770
XM1_4209
Putative adenylate cyclase (Partial); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.769
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.