STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4374Homologs of previously reported genes of unknown function. (181 aa)    
Predicted Functional Partners:
fliM
Flagellar motor switch protein fliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
     0.951
XM1_4375
Homologs of previously reported genes of unknown function.
 
     0.947
fliL
Flagellar basal body-associated protein fliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
     0.941
XM1_4378
Homologs of previously reported genes of unknown function.
 
     0.894
flgA
Flagellar basal body P-ring biosynthesis protein FlgA; Function of strongly homologous gene; structure.
 
     0.846
XM1_4377
Putative Protein phosphatase CheZ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.820
XM1_1536
Putative Flagellar assembly regulator FliX(Flagellar assembly regulator FliX, class II,1-141); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.766
fliH
Putative metal-binding protein CopG protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.737
XM1_4784
Putative flagelar FliJ protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
     0.717
XM1_1534
Putative flagellar protein FlgJ, N-terminal(Flagellar protein FlgJ, N-terminal,51-98); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
     0.708
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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