STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4375Homologs of previously reported genes of unknown function. (257 aa)    
Predicted Functional Partners:
fliL
Flagellar basal body-associated protein fliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
 
 0.997
fliM
Flagellar motor switch protein fliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.995
flgH
Flagellar L-ring protein flgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.985
fliH
Putative metal-binding protein CopG protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
    0.976
flgA
Flagellar basal body P-ring biosynthesis protein FlgA; Function of strongly homologous gene; structure.
 
    0.973
fliE
Flagellar hook-basal body complex protein FliE; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
  
 0.970
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.967
fliG
Putative metal dependent phosphohydrolase; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.965
czcB-3
Putative Flagellar hook capping protein flgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.962
FliF
Conserved exported protein of unknown function(Cytochrome c domain,10-223); The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.962
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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