STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheY-8Chemotaxis regulator transmitting signal to flagellar motor component cheY; Function of homologous gene experimentally demonstrated in an other organism; regulator. (128 aa)    
Predicted Functional Partners:
XM1_4377
Putative Protein phosphatase CheZ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.968
XM1_0440
Putative inhibitor of MCP methylation, CheC-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
     
 0.902
XM1_0327
Conserved protein of unknown function（Chemotaxis phosphatase, CheZ） Homologs of previously reported genes of unknown function.
 
 
 0.865
cheW
Chemotaxis signal transduction protein（CheW-like protein,18-155） Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 
 0.842
cheA
Uncharacterized protein; Function of strongly homologous gene; enzyme.
 
0.829
fliM
Flagellar motor switch protein fliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.820
XM1_1522
Conserved protein of unknown function (Chemotaxis phosphatase, CheZ; Homologs of previously reported genes of unknown function.
 
 
 0.813
XM1_4558
Putative histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.811
XM1_4378
Homologs of previously reported genes of unknown function.
 
     0.808
XM1_1590
Homologs of previously reported genes of unknown function.
 
 
 0.792
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.