STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4397Putative permease of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (697 aa)    
Predicted Functional Partners:
XM1_4396
Putative ABC transporter, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
   
 0.953
XM1_4398
Conserved protein of unknown function (Methyl-accepting chemotaxis protein); Homologs of previously reported genes of unknown function.
 
     0.947
XM1_4394
Putative serine phosphatase RsbU, regulator of sigma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.910
XM1_4395
Putative methionyl-tRNA formyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.848
XM1_4393
Putative anti-sigma factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the anti-sigma-factor antagonist family.
 
     0.823
XM1_2449
Putative hybrid sensor and regulator (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
   
 
 0.802
XM1_4030
Putative hybrid sensor and regulator (Signal transduction histidine kinase, homodimeric 904-989; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
   
 
 0.802
XM1_2238
Putative Signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.732
XM1_3997
Putative serine/threonine kinase with signal transduction histidinekinase and gaf sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.648
XM1_2649
Putative ATPase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.643
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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