STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4544Putative ABC transporter, periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (423 aa)    
Predicted Functional Partners:
XM1_4545
Conserved protein of unknown function (Cytochrome c domain 279-445); Homologs of previously reported genes of unknown function.
 
    0.887
XM1_4542
TonB-dependent receptor; Function of strongly homologous gene; transporter.
 
  
 0.832
XM1_1370
Iron(III) transport system permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.817
XM1_4543
Putative TonB family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.751
XM1_4541
Protein of unknown function; No homology to any previously reported sequences.
       0.576
XM1_0563
Uncharacterized protein; Homologs of previously reported genes of unknown function.
   
  
 0.550
XM1_4546
Putative transcriptional regulator, ModE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
    0.537
XM1_1371
Iron(III)-transport system ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
  
  
 0.511
potG
Putrescine transporter subunit: ATP-binding component of ABC superfamily; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
  
 0.511
XM1_2244
Putative High-affinity Fe2+/Pb2+ permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
   
  
 0.474
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.