STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
XM1_4546Putative transcriptional regulator, ModE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (137 aa)    
Predicted Functional Partners:
XM1_4542
TonB-dependent receptor; Function of strongly homologous gene; transporter.
 
     0.671
nifQ-2
NifQ protein,Protein involved in biosynthesis of iron-molybdenum cofactor of nitrogenase; Function of strongly homologous gene; factor.
       0.580
XM1_4543
Putative TonB family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.568
moaA
Cyclic pyranopterin monophosphate synthase(Molybdenum cofactor biosynthesis protein A,1-328); Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
  
 0.544
modC
Molybdate transporter subunit modC (ATP-binding component of ABC superfamily); Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.
 
 
 
 0.544
XM1_4545
Conserved protein of unknown function (Cytochrome c domain 279-445); Homologs of previously reported genes of unknown function.
  
    0.542
XM1_4544
Putative ABC transporter, periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
    0.537
modA
Molybdate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
   
 0.517
modB
Molybdate transporter subunit (membrane component of ABC superfamily); Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
   
 0.475
XM1_4541
Protein of unknown function; No homology to any previously reported sequences.
       0.405
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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