Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dnaE | dnaN | XM1_3378 | XM1_0003 | DNA polymerase III subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.977 |
| dnaE | imuA | XM1_3378 | XM1_4573 | DNA polymerase III subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Damage-inducible mutagenesis protein (ImuA-like); Function of strongly homologous gene; enzyme. | 0.567 |
| dnaE | imuB | XM1_3378 | XM1_4572 | DNA polymerase III subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Damage-inducible mutagenesis protein (ImuB-like); Function of strongly homologous gene; putative enzyme. | 0.638 |
| dnaE | polA | XM1_3378 | XM1_0408 | DNA polymerase III subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.656 |
| dnaE | recA | XM1_3378 | XM1_0199 | DNA polymerase III subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | DNA strand exchange and recombination protein with protease and nuclease activity; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.434 |
| dnaE-2 | dnaN | XM1_4571 | XM1_0003 | Error-prone DNA polymerase dnaE; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.728 |
| dnaE-2 | imuA | XM1_4571 | XM1_4573 | Error-prone DNA polymerase dnaE; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | Damage-inducible mutagenesis protein (ImuA-like); Function of strongly homologous gene; enzyme. | 0.940 |
| dnaE-2 | imuB | XM1_4571 | XM1_4572 | Error-prone DNA polymerase dnaE; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | Damage-inducible mutagenesis protein (ImuB-like); Function of strongly homologous gene; putative enzyme. | 0.950 |
| dnaE-2 | polA | XM1_4571 | XM1_0408 | Error-prone DNA polymerase dnaE; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.612 |
| dnaN | dnaE | XM1_0003 | XM1_3378 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.977 |
| dnaN | dnaE-2 | XM1_0003 | XM1_4571 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Error-prone DNA polymerase dnaE; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.728 |
| dnaN | imuB | XM1_0003 | XM1_4572 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Damage-inducible mutagenesis protein (ImuB-like); Function of strongly homologous gene; putative enzyme. | 0.777 |
| dnaN | polA | XM1_0003 | XM1_0408 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.989 |
| dnaN | recA | XM1_0003 | XM1_0199 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA strand exchange and recombination protein with protease and nuclease activity; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.880 |
| imuA | dnaE | XM1_4573 | XM1_3378 | Damage-inducible mutagenesis protein (ImuA-like); Function of strongly homologous gene; enzyme. | DNA polymerase III subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.567 |
| imuA | dnaE-2 | XM1_4573 | XM1_4571 | Damage-inducible mutagenesis protein (ImuA-like); Function of strongly homologous gene; enzyme. | Error-prone DNA polymerase dnaE; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.940 |
| imuA | imuB | XM1_4573 | XM1_4572 | Damage-inducible mutagenesis protein (ImuA-like); Function of strongly homologous gene; enzyme. | Damage-inducible mutagenesis protein (ImuB-like); Function of strongly homologous gene; putative enzyme. | 0.986 |
| imuB | dnaE | XM1_4572 | XM1_3378 | Damage-inducible mutagenesis protein (ImuB-like); Function of strongly homologous gene; putative enzyme. | DNA polymerase III subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.638 |
| imuB | dnaE-2 | XM1_4572 | XM1_4571 | Damage-inducible mutagenesis protein (ImuB-like); Function of strongly homologous gene; putative enzyme. | Error-prone DNA polymerase dnaE; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.950 |
| imuB | dnaN | XM1_4572 | XM1_0003 | Damage-inducible mutagenesis protein (ImuB-like); Function of strongly homologous gene; putative enzyme. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.777 |
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