STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
imuADamage-inducible mutagenesis protein (ImuA-like); Function of strongly homologous gene; enzyme. (251 aa)    
Predicted Functional Partners:
imuB
Damage-inducible mutagenesis protein (ImuB-like); Function of strongly homologous gene; putative enzyme.
 
  
 0.986
dnaE-2
Error-prone DNA polymerase dnaE; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
 
  
 0.940
umuC-2
DNA polymerase V, subunit C; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.678
umuC-3
DNA polymerase V, subunit C; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.678
umuC-4
DNA polymerase V, subunit C; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.678
dinB
DNA polymerase IV (damage-inducible protein P); Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
  
  
 0.678
dnaE
DNA polymerase III subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.567
recN
DNA repair protein RecN(DNA recombination/repair protein RecN,1-552); May be involved in recombinational repair of damaged DNA.
   
  
 0.495
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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