STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4608Protein of unknown function; No homology to any previously reported sequences. (501 aa)    
Predicted Functional Partners:
XM1_0649
Protein of unknown function; No homology to any previously reported sequences.
  
    0.736
XM1_4611
Conserved protein of unknown function (C-5 cytosine methyltransferase 91-215; Homologs of previously reported genes of unknown function.
       0.583
XM1_4609
Conserved protein of unknown function (Zinc finger, DksA/TraR C4-type 32-65); Homologs of previously reported genes of unknown function.
       0.571
XM1_4610
Protein of unknown function; No homology to any previously reported sequences.
       0.571
XM1_4612
Homologs of previously reported genes of unknown function.
       0.571
XM1_0445
Putative Type I restriction-modification system methylation subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.450
XM1_4613
Homologs of previously reported genes of unknown function.
       0.450
XM1_4748
Type I restriction system adenine methylase HsdM; Function of strongly homologous gene; enzyme.
  
    0.450
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.