STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4611Conserved protein of unknown function (C-5 cytosine methyltransferase 91-215; Homologs of previously reported genes of unknown function. (722 aa)    
Predicted Functional Partners:
XM1_4609
Conserved protein of unknown function (Zinc finger, DksA/TraR C4-type 32-65); Homologs of previously reported genes of unknown function.
       0.773
XM1_4610
Protein of unknown function; No homology to any previously reported sequences.
       0.773
XM1_4612
Homologs of previously reported genes of unknown function.
       0.773
XM1_4613
Homologs of previously reported genes of unknown function.
       0.596
XM1_4608
Protein of unknown function; No homology to any previously reported sequences.
       0.583
XM1_4614
Homologs of previously reported genes of unknown function.
       0.478
XM1_0554
Homologs of previously reported genes of unknown function.
  
     0.417
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.