STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4633Putative TRAP-type uncharacterized transport system, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (312 aa)    
Predicted Functional Partners:
XM1_4632
Putative transporter TrapT family, fused dctQ-M subunits, C4-dicarboxylate transport; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
  0.995
dctM-2
TRAP-type C4-dicarboxylate transport system, large permease component DctM; Function of strongly homologous gene; transporter.
  
  
  0.941
dctP
C4-dicarboxylate-binding periplasmic protein DctP; Function of strongly homologous gene; transporter.
  
  
 0.939
XM1_4631
Conserved protein of unknown function (DUF 1850); Homologs of previously reported genes of unknown function.
 
    0.931
XM1_4634
Conserved protein of unknown function (Uncharacterized iron-regulated protein 55-265); Homologs of previously reported genes of unknown function.
  
    0.600
XM1_2692
Putative TRAP-type C4-dicarboxylate transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
   
 0.537
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.