STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4673Putative response regulator transcriptional regulatory protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (236 aa)    
Predicted Functional Partners:
XM1_3529
Putative Sensor protein czcS; Member of a two-component regulatory system.
 
 
 0.834
XM1_4153
Putative regulator two-component hybrid sensor and regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.824
XM1_3525
Histidine kinase domain-containing protein; Homologs of previously reported genes of unknown function.
 
 
 0.814
XM1_3449
Signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
 
 0.813
XM1_4411
Putative sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.805
XM1_1590
Homologs of previously reported genes of unknown function.
 
 
 0.801
XM1_2933
Putative signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.786
XM1_4009
Putative histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.785
XM1_1850
Two-component system, cell cycle sensor histidine kinase PleC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.774
XM1_2189
Putative Signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 0.772
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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