STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4713Conserved protein of unknown function (Flagellar FlaF 15-111); Homologs of previously reported genes of unknown function. (125 aa)    
Predicted Functional Partners:
XM1_4717
Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.899
XM1_1532
Putative Flagellar hook-associated protein(Flagellar hook-associated protein, FlgK,7-365); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure; Belongs to the flagella basal body rod proteins family.
 
  
 0.898
XM1_1262
Putative Serine phosphatase RsbU(GAF domain,29-176;Protein phosphatase 2C-like,228-414); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.885
XM1_1531
Conserved protein of unknown function (Flagellin, D0/D1 domain); Homologs of previously reported genes of unknown function.
 
  
 0.862
XM1_4394
Putative serine phosphatase RsbU, regulator of sigma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.856
XM1_4711
Conserved protein of unknown function (Flagellar FlaF 7-16); Homologs of previously reported genes of unknown function.
 
     0.833
XM1_1530
Putative flagellum biosynthesis repressor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
  
 0.822
czcA-2
Putative Flagellar hook protein FlgE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
  
 0.815
XM1_1602
Homologs of previously reported genes of unknown function.
  
     0.767
XM1_1542
Conserved exported protein of unknown function(Glycoside hydrolase, superfamily,261-397); Homologs of previously reported genes of unknown function.
  
     0.765
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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