STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4714Putative TPR repeat-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (336 aa)    
Predicted Functional Partners:
XM1_4715
Putative tetratricopeptide repeat-containing domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
     0.842
XM1_4716
Conserved protein of unknown function (6-hydroxymethylpterin diphosphokinase MptE-like 270-419); Homologs of previously reported genes of unknown function.
  
  
 0.821
XM1_4717
Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 
 0.612
XM1_3375
SAM-dependent methyltransferase; Function of strongly homologous gene; enzyme.
     0.473
XM1_4719
Protein of unknown function; No homology to any previously reported sequences.
       0.473
XM1_0565
Putative Polyferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
     0.423
XM1_3481
4Fe-4S ferredoxin, iron-sulfur binding; Function of strongly homologous gene; carrier.
  
   0.417
XM1_0562
Homologs of previously reported genes of unknown function.
  
    0.411
XM1_3698
O-linked N-acetylglucosamine transferase; Function of strongly homologous gene; enzyme.
     0.411
nosG
4Fe-4S ferredoxin, iron-sulfur binding; Function of strongly homologous gene; enzyme.
  
   0.409
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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