STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4716Conserved protein of unknown function (6-hydroxymethylpterin diphosphokinase MptE-like 270-419); Homologs of previously reported genes of unknown function. (666 aa)    
Predicted Functional Partners:
XM1_4717
Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.863
XM1_4714
Putative TPR repeat-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
  
 0.821
XM1_4715
Putative tetratricopeptide repeat-containing domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
       0.815
XM1_1021
Homologs of previously reported genes of unknown function.
  
  
 0.790
XM1_1531
Conserved protein of unknown function (Flagellin, D0/D1 domain); Homologs of previously reported genes of unknown function.
 
 
 0.768
XM1_4202
Conserved protein of unknown function (Integrase-like, catalytic core 247-449); Homologs of previously reported genes of unknown function.
  
     0.724
XM1_1625
Homologs of previously reported genes of unknown function.
  
     0.646
XM1_2364
Homologs of previously reported genes of unknown function.
  
    0.644
XM1_0710
Homologs of previously reported genes of unknown function.
  
     0.631
XM1_3045
Cytochrome b subunit of the bc complex; Function of strongly homologous gene; enzyme.
  
 
   0.624
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.