STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4748Type I restriction system adenine methylase HsdM; Function of strongly homologous gene; enzyme. (499 aa)    
Predicted Functional Partners:
XM1_4747
Putative restriction endonuclease, type I, HsdS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.994
XM1_4745
Putative type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.992
XM1_0446
Putative Type I restriction-modification system methylation subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.974
XM1_0447
Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.967
XM1_4744
Conserved protein of unknown function (Predicted metal-dependent hydrolase 4-242); Homologs of previously reported genes of unknown function.
 
     0.923
XM1_4746
Protein of unknown function; No homology to any previously reported sequences.
       0.788
XM1_0649
Protein of unknown function; No homology to any previously reported sequences.
  
  
 0.640
XM1_4743
Putative DNA polymerase III, epsilon subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.640
XM1_4741
Putative endonuclease precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.635
XM1_4742
Homologs of previously reported genes of unknown function.
       0.622
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.