STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_4758Putative acyl hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (378 aa)    
Predicted Functional Partners:
dprA
DNA processing single strand binding protein; Function of strongly homologous gene; factor.
       0.710
phbC
Poly-beta-hydroxybutyrate polymerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.548
XM1_3364
Phosphotransacetylase; Function of strongly homologous gene; enzyme.
 
     0.538
XM1_4759
Putative cyclic nucleotide-binding-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.518
XM1_4760
Putative auxin efflux carrier; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
       0.518
XM1_4432
Putative poly-beta-hydroxybutyrate polymerase C; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.452
XM1_1603
Putative Cytochrome B561（Di-haem cytochrome, transmembrane,2-179） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.449
XM1_4763
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); Function of strongly homologous gene; enzyme.
  
    0.437
XM1_4513
Conserved protein of unknown function (Staphylococcal nuclease 40-167); Homologs of previously reported genes of unknown function.
 
   
 0.432
XM1_3493
Putative dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 
 0.420
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.